| Stanford University Tressider Meeting
Services |
|
| 459 Lagunita Drive,
Suite 1, Oak West Conference Room, Stanford, CA 94305 |
|
| Name |
Group |
Titles |
Presentation
sequence |
Allocated
time(mins) |
Time |
|
| |
|
Day 1 - 8:15 - 9:00 am
Continental Breakfast |
|
|
|
|
| Day 1 (April 27, 2006) |
|
9:00
am - 6:00pm |
|
|
|
|
| Chair: Wah Chiu |
|
|
|
|
| Schloss, Jeff |
NIH |
Nanomedicine Roadmap |
1 |
20 |
9:00am - 9:20am |
|
| Chiu, Wah |
Chiu |
Center goals and
organization |
2 |
20 |
9:20am - 9:40am |
|
| King, Jonathan |
King |
Folding, Misfolding and Aggregation - Why Chaperonins are
Essential |
3 |
25 |
9:40am - 10:05am |
|
| Frydman.
Judith |
Frydman |
The chaperonins: mechanism and
biological function |
4 |
25 |
10:05am - 10:30am |
|
| |
|
MORNING BREAK |
|
20 |
10:30am - 10:50am |
1.83 |
| Chair: Jon
King |
|
|
|
|
|
|
| Moerner, W.E. |
Moerner |
Fluorescence
approaches overview, TriC/VHL/GroEL plans |
5 |
25 |
10:50am - 11:15am |
|
| Adams, Paul |
Adams |
Crystallographic
imaging of the folding machinery |
6 |
25 |
11:15am -11:40am |
|
| Chiu, Wah |
Chiu |
CryoEM of Nanomachine
and cell |
7 |
15 |
11:40am - 11:55am |
|
| Ludtke, Steven |
Ludtke |
Single particle
reconstruction and e-notebook |
8 |
25 |
11:55am - 12:20pm |
|
| |
|
LUNCH |
|
60 |
12:20pm - 1:20pm |
2.50 |
| Chair: Paul
Adams |
|
|
|
|
|
|
| Sali, Andrej |
Sali |
Modeling the
structures of macromolecular assemblies |
9 |
25 |
1:20pm - 1:45pm |
|
| Levitt,
Michael |
Levitt |
Mesoscale modeling of
nano-machines |
10 |
25 |
1:45pm - 2:10pm |
|
| Pande, Vijay |
Pande |
Introduction to Pande
Lab computational approaches |
11 |
25 |
2:10pm - 2:35pm |
|
| Kortemme,
Tanja |
Kortemme |
Introduction to
computational protein engineering |
12 |
25 |
2:35pm - 3:00pm |
|
| Gossard, David |
Gossard |
An Engineering
Perspective |
13 |
15 |
3:00pm - 3:15pm |
|
| |
|
AFTERNOON BREAK |
|
20 |
3:15pm - 3:35pm |
1.92 |
| Chair: Judith
Frydman |
|
|
|
|
|
|
| Meyer, Anne |
Frydman |
The ATPase cycle of TRiC |
14 |
15 |
3:35pm - 3:50pm |
|
| Booth,
Christopher |
Chiu |
Low Resolution cryoEM
structures of TRiC of two functional states |
15 |
15 |
3:50pm - 4:05pm |
|
| Cong, Yao |
Chiu |
CryoEM restrainted
homology modeling of TRiC |
16 |
15 |
4:05pm - 4:20pm |
|
| Topf, Maya |
Sali |
Modeling of TriC
based on multiple sources of information |
17 |
15 |
4:20pm - 4:35pm |
|
| Chen, Donghua |
Chiu |
Subnanometer
resolution structure of TRiC in closed state |
18 |
15 |
4:35pm - 4:50pm |
|
| Lucent, Del |
Pande |
Effect of confinement
on protein folding dynamics |
19 |
15 |
4:50pm - 5:05pm |
|
| Petron, Paula |
Pande |
New normal mode
methods for dynamics and structure determination |
20 |
15 |
5:05pm - 5:20pm |
|
| Vaidyanathan,
Vishal |
Pande |
Structure of water
inside chaperones |
21 |
15 |
5:20pm - 5:35pm |
|
| |
|
|
|
|
|
2.00 |
| Total hours |
|
|
|
8.58 |
|
|
| Dinner at
Stanford Faculty Club at 6:30pm for all
participants (RSVP is required by April 20) |
|
|
|
|
|
|
| |
|
|
|
|
|
|
| |
|
Day 2 - 8:15 - 9:00 am Continental Breakfast |
|
|
|
|
| Day 2 (April
28, 2006) |
|
9:00 am - 6:00pm |
|
|
|
|
| Chair: W.E. Moerner |
|
|
|
|
| Reissmann, Stefanie |
Frydman |
The conformational cycle of
Eukaryotic and archeal chaperonins |
22 |
15 |
9:00am - 9:15am |
|
| Zhang, Jungie
(George) |
Chiu |
CryoEM of Mm-cpn with
nucleotide |
23 |
15 |
9:15am - 9:30am |
|
| Miller, Erik |
Frydman |
Developing fluorescence spectroscopy to study
chaperonins |
24 |
15 |
9:30am - 9:45am |
|
| Kim, So Yeon |
Moerner |
Sensing chaperonin
conformational changes |
25 |
15 |
9:45am - 10:00am |
|
| Cohen, Adam |
Moerner |
ABEL trap |
26 |
15 |
10:00am - 10:15am |
|
| Mills, Ishara |
King |
Partially Folded Intermediates of the Eukaryotic Eye Lens
Crystallins |
27 |
15 |
10:15am - 10:30am |
|
| |
|
MORNING BREAK |
|
20 |
10:30am - 10:50am |
2.83 |
| Chair: Tanja
Kortemme |
|
|
|
|
|
|
| Jaswal, Sheila |
Frydman |
H-DX: a novel
technique to map folding landscapes |
28 |
15 |
10:50am - 11:05am |
|
| Spiess,
Christoph |
Frydman |
Dissection of substrate binding interactions of the
eukaryotic chaperonin |
29 |
15 |
11:05am - 11:20am |
|
| Tam, Stephen |
Frydman |
TRiC is a suppressor
of polyQ toxicity and aggregation |
30 |
15 |
11:20am - 11:35am |
|
| Mandell, Dan |
Kortemme |
Methods for
computational design of chaperonin adaptors |
31 |
15 |
11:35am - 11:50am |
|
| Weiss, Dahlia |
Levitt |
Modeling myosin a
simple molecular motor |
32 |
15 |
11:50am - 12:05pm |
|
| |
|
LUNCH |
|
60 |
12:05pm - 1:00pm |
1.25 |
| Chair: Vijay
Pande |
|
|
|
|
|
|
| Other Centers |
Sheetz/Jakobsson |
http://nihroadmap.nih.gov/nanomedicine/fundedresearch.asp |
33 |
45 |
1:00pm - 1:45pm |
|
| Education |
King |
Outreach, teaching,
diversity |
34 |
30 |
1:45pm - 2:15pm |
|
| Communication |
Trujillo |
Breeze, travel
reimbursements and subcontracts |
35 |
30 |
2:15pm -2:45pm |
|
| |
|
AFTERNOON BREAK |
|
30 |
2:45pm - 3:15pm |
3.75 |
| Chair: Andrej
Sali |
|
|
|
|
|
|
| Milestones for
year 02 |
Levitt |
Revised milestone and
budget for future years |
36 |
90 |
3:15pm - 4:45pm |
|
| Other Business |
Chiu |
Supplemental fund
request |
37 |
30 |
4:45pm - 5:15pm |
|
| Advisory
meeting |
Baldwin-Brems |
Executive session |
38 |
30 |
5:15pm - 5:45pm |
3.50 |
| |
|
|
|
|
|
|
| Total hours |
|
|
|
8.83 |
|
|
| |
|
|
|
|
|
|
| |
|
Day 3 - 8:30 - 9:00 am Continental Breakfast |
|
|
|
|
| Day 3 (April
29, 2006) |
|
9:00 am - noon |
|
|
|
|
| Chair: Michael Levitt |
|
|
|
|
| Small groups discussions |
Everyone |
|
|
120 |
9:00am - 11:00am |
|
| Summary |
Chiu |
|
|
45 |
11:00am - 11:45 |
|
| |
|
|
|
|
|
|
| Total hours |
|
|
|
2.75 |
|
|
|
|
|
|
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